PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026457609.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 780aa MW: 88018.6 Da PI: 6.5745

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026457609.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	62.3	7.8e-20	641	737	2	95
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 +kvl++sdv+++gr+vlpkk ae++ +++ + ++ + +ed ++r+W++++++ ++ks++y+l+ ++ +Fv++ngL+egDf+v++ ++ +++ XP_026457609.1 641 QKVLKQSDVGNLGRIVLPKKEAETYlpELEARDGISIAMEDiGTSRVWNMRYRFwpNNKSRMYLLE-NTGDFVRSNGLQEGDFIVIY--SDiKCG 732 79***********************999999****7778***99777777777777.******************..677999 PP ..EEE CS B3 91 elvvk 95 +++++ XP_026457609.1 733 KFMIR 737 77765 PP

Sequence ? help Back to Top
Protein Sequence Length: 780 aa Download sequence
MKTMHGDGTE QNHQENEEKY DEDDRRRRRD MYEQINPSNN YENTMDWEDE VIGAEDLLHV 60 DDTLMSYGDF PPLPDFPCIS SPSSSSKSCY SSSAPPPTSS VSQRQHHGSV TCRNNSFPSS 120 SATSSASSSA SWAVGKSDHK EHSAVDEKTK NQEYHENRYG NLLSTTDSME IQQDELNRLE 180 SGDCMDVMEG FGEIGLFDTD DIWDPSCLFP YEEEEEGFHQ PKEDHKCLVD RETVDNDNDG 240 DQEKNNKPSE DLALVFLEWL KSNKETISAE DLRSIKLKRS TIECAAKRLG GGKEGMKQLL 300 KLILEWVQNN HLQKKRLKEG QASSFPSYSS QQQHQNCNPN SHEFSSFTPP ESNPACFVPT 360 ANPWNVSRNP PPPVVPPSTY VSDPMTSGLA VYPPPPPPPM HGFINGDPSV LVPHFNQSPY 420 PSSEEYMFDA SSHLQNWAHH QPPPPTHHFS LSSHPYGASY HHQDPHAHHL QQPPPPPPLS 480 RSFLNYHQNQ YQSCHQMFQG SNTTTSDGSL IRLGSSATKE ARKKRMARQR KIFSHHQRHA 540 QNNHQTTDLQ QTRVSNDTTT THHQTLNNSA NWVFWSPSPP PPITVCGSLS PMMMVSEGRP 600 LTVDPPLQPT QSPPNYHKHI NMENRRQGCK PAEKNLKFLL QKVLKQSDVG NLGRIVLPKK 660 EAETYLPELE ARDGISIAME DIGTSRVWNM RYRFWPNNKS RMYLLENTGD FVRSNGLQEG 720 DFIVIYSDIK CGKFMIRGVK VRQPGSKSEA KKSAKANRNL HANSPMCEGP SASMIKQAVA

Sequence ? help Back to Top

Protein Sequence Length: 780 aa Download sequence

MKTMHGDGTE QNHQENEEKY DEDDRRRRRD MYEQINPSNN YENTMDWEDE VIGAEDLLHV  60
DDTLMSYGDF PPLPDFPCIS SPSSSSKSCY SSSAPPPTSS VSQRQHHGSV TCRNNSFPSS  120
SATSSASSSA SWAVGKSDHK EHSAVDEKTK NQEYHENRYG NLLSTTDSME IQQDELNRLE  180
SGDCMDVMEG FGEIGLFDTD DIWDPSCLFP YEEEEEGFHQ PKEDHKCLVD RETVDNDNDG  240
DQEKNNKPSE DLALVFLEWL KSNKETISAE DLRSIKLKRS TIECAAKRLG GGKEGMKQLL  300
KLILEWVQNN HLQKKRLKEG QASSFPSYSS QQQHQNCNPN SHEFSSFTPP ESNPACFVPT  360
ANPWNVSRNP PPPVVPPSTY VSDPMTSGLA VYPPPPPPPM HGFINGDPSV LVPHFNQSPY  420
PSSEEYMFDA SSHLQNWAHH QPPPPTHHFS LSSHPYGASY HHQDPHAHHL QQPPPPPPLS  480
RSFLNYHQNQ YQSCHQMFQG SNTTTSDGSL IRLGSSATKE ARKKRMARQR KIFSHHQRHA  540
QNNHQTTDLQ QTRVSNDTTT THHQTLNNSA NWVFWSPSPP PPITVCGSLS PMMMVSEGRP  600
LTVDPPLQPT QSPPNYHKHI NMENRRQGCK PAEKNLKFLL QKVLKQSDVG NLGRIVLPKK  660
EAETYLPELE ARDGISIAME DIGTSRVWNM RYRFWPNNKS RMYLLENTGD FVRSNGLQEG  720
DFIVIYSDIK CGKFMIRGVK VRQPGSKSEA KKSAKANRNL HANSPMCEGP SASMIKQAVA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	24	30	DRRRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	9e-85	B3 family protein