PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026457780.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Nin-like

Protein Properties

Length: 1022aa MW: 112393 Da PI: 5.0902

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026457780.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.9	4.6e-29	619	669	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ XP_026457780.1 619 EKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 669 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1022 aa Download sequence
MSEPEEEENQ TTFIPKSSTD KSSVDKDSLM DLDLDFDSSS WPFDQTSFCP RPSSPFFLSI 60 FSSTSSQNQN QQPQLPLVNV SSVEQQQPSS PLWVFSDGDD DKFGSALNGF SSLATSGASI 120 RISDYPKLIS RIPESMTVRT EDEKVCLPPT RVVPAESQDL SCVIKERITQ ALRYFKESTE 180 QTVLAQVWAP IKNGDRYVLT TSGQPFVLDP HSNGLLNYRT VSLMYMFSVD EENDGNMGLP 240 GRVFRQKLPE WTPNVQYYSK NEYPRLIHAL NYNVRGTLAL PVFEPSGQSC VAVIELILTS 300 QKVNYAPEVD KVCKALEVLS VYVQAVNLKS SDILDNPNLQ ICNEGRQLAL AEILEILNVV 360 CEAHKLPLAQ TWVPCRHRSV LADGGGVKKS CSSFDGSCVG QVCMSTTDVA FYVVDAHMWG 420 FRDACAEHHL QKGQGVAGRA FASHSSCFSR DITQFSKTEY PLVHYSLMFG LMSCYAICLR 480 SSHTGSDDYI LEFFLPPSIT DDGEQQDLLS SIMTSMKEHF RSLRVATEHD VEDEKRFIEI 540 VEPVIGEKGV LNSEVFCGIS PRGPDSLPNG LSKRKLMAPY DGLSNGENCT GVDGSNASVS 600 VPGNKGTKKP TERRRGKTEK SISLEVLQQY FAGSLKDAAK SLGVCPTTMK RICRQHGISR 660 WPSRKINKVN RSLSKLKRVI ESVEGGEGTF NLTSLSTSTP LSVAVGSISW PVSLEGPKEQ 720 QSEFQGSKEN QSPTQMTLQS TFRGESGNRG VLLSHQEINH EQNGSHSKFR KGPNGSKSRS 780 GSADGSTGNP ASHGSSQSSP ANEIPPLNDF LVHSNQEQGL NIGNSLNVVF PQNGELNLTA 840 AFSIPDALVA TQQQLPQPLG GMLVEDAGSS KDLSNLCSLA VEVESGLDDQ VPDSSWMNPP 900 VLDQTTYQEM APTRTMPHIT ATQDVRTITI KATYRDDIIR FRLLLTSSLI ELKEEVAKRL 960 KLEVGTFEIK YLDDDQEWVV LACDADLQEC LEISRSSGKH MIRLLVHDMI ANLGSSCESS 1020 GE

Sequence ? help Back to Top

Protein Sequence Length: 1022 aa Download sequence

MSEPEEEENQ TTFIPKSSTD KSSVDKDSLM DLDLDFDSSS WPFDQTSFCP RPSSPFFLSI  60
FSSTSSQNQN QQPQLPLVNV SSVEQQQPSS PLWVFSDGDD DKFGSALNGF SSLATSGASI  120
RISDYPKLIS RIPESMTVRT EDEKVCLPPT RVVPAESQDL SCVIKERITQ ALRYFKESTE  180
QTVLAQVWAP IKNGDRYVLT TSGQPFVLDP HSNGLLNYRT VSLMYMFSVD EENDGNMGLP  240
GRVFRQKLPE WTPNVQYYSK NEYPRLIHAL NYNVRGTLAL PVFEPSGQSC VAVIELILTS  300
QKVNYAPEVD KVCKALEVLS VYVQAVNLKS SDILDNPNLQ ICNEGRQLAL AEILEILNVV  360
CEAHKLPLAQ TWVPCRHRSV LADGGGVKKS CSSFDGSCVG QVCMSTTDVA FYVVDAHMWG  420
FRDACAEHHL QKGQGVAGRA FASHSSCFSR DITQFSKTEY PLVHYSLMFG LMSCYAICLR  480
SSHTGSDDYI LEFFLPPSIT DDGEQQDLLS SIMTSMKEHF RSLRVATEHD VEDEKRFIEI  540
VEPVIGEKGV LNSEVFCGIS PRGPDSLPNG LSKRKLMAPY DGLSNGENCT GVDGSNASVS  600
VPGNKGTKKP TERRRGKTEK SISLEVLQQY FAGSLKDAAK SLGVCPTTMK RICRQHGISR  660
WPSRKINKVN RSLSKLKRVI ESVEGGEGTF NLTSLSTSTP LSVAVGSISW PVSLEGPKEQ  720
QSEFQGSKEN QSPTQMTLQS TFRGESGNRG VLLSHQEINH EQNGSHSKFR KGPNGSKSRS  780
GSADGSTGNP ASHGSSQSSP ANEIPPLNDF LVHSNQEQGL NIGNSLNVVF PQNGELNLTA  840
AFSIPDALVA TQQQLPQPLG GMLVEDAGSS KDLSNLCSLA VEVESGLDDQ VPDSSWMNPP  900
VLDQTTYQEM APTRTMPHIT ATQDVRTITI KATYRDDIIR FRLLLTSSLI ELKEEVAKRL  960
KLEVGTFEIK YLDDDQEWVV LACDADLQEC LEISRSSGKH MIRLLVHDMI ANLGSSCESS  1020
GE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein