PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026457781.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Nin-like

Protein Properties

Length: 1015aa MW: 111604 Da PI: 5.0902

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026457781.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92	4.6e-29	612	662	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ XP_026457781.1 612 EKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 662 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1015 aa Download sequence
MSEPEEEENQ TTFIPKSSTD KSSVDKDSLM DLDLDFDSSS WPFDQTSFCP RPSSPFFLSI 60 FSSTSSQNQN QQPQLPLVNV SSVEQQQPSS PLWVFSDGDD DKFGSALNGF SSLATSGASI 120 RISDYPKLIS RIPESMTVRT EDEKVCLPPT RVVPAESQDL SCVIKERITQ ALRYFKESTE 180 QTVLAQVWAP IKNGDRYVLT TSGQPFVLDP HSNGLLNYRT VSLMYMFSVD EENDGNMGLP 240 GRVFRQKLPE WTPNVQYYSK NEYPRLIHAL NYNVRGTLAL PVFEPSGQSC VAVIELILTS 300 QKVNYAPEVD KVCKALEAVN LKSSDILDNP NLQICNEGRQ LALAEILEIL NVVCEAHKLP 360 LAQTWVPCRH RSVLADGGGV KKSCSSFDGS CVGQVCMSTT DVAFYVVDAH MWGFRDACAE 420 HHLQKGQGVA GRAFASHSSC FSRDITQFSK TEYPLVHYSL MFGLMSCYAI CLRSSHTGSD 480 DYILEFFLPP SITDDGEQQD LLSSIMTSMK EHFRSLRVAT EHDVEDEKRF IEIVEPVIGE 540 KGVLNSEVFC GISPRGPDSL PNGLSKRKLM APYDGLSNGE NCTGVDGSNA SVSVPGNKGT 600 KKPTERRRGK TEKSISLEVL QQYFAGSLKD AAKSLGVCPT TMKRICRQHG ISRWPSRKIN 660 KVNRSLSKLK RVIESVEGGE GTFNLTSLST STPLSVAVGS ISWPVSLEGP KEQQSEFQGS 720 KENQSPTQMT LQSTFRGESG NRGVLLSHQE INHEQNGSHS KFRKGPNGSK SRSGSADGST 780 GNPASHGSSQ SSPANEIPPL NDFLVHSNQE QGLNIGNSLN VVFPQNGELN LTAAFSIPDA 840 LVATQQQLPQ PLGGMLVEDA GSSKDLSNLC SLAVEVESGL DDQVPDSSWM NPPVLDQTTY 900 QEMAPTRTMP HITATQDVRT ITIKATYRDD IIRFRLLLTS SLIELKEEVA KRLKLEVGTF 960 EIKYLDDDQE WVVLACDADL QECLEISRSS GKHMIRLLVH DMIANLGSSC ESSGE

Sequence ? help Back to Top

Protein Sequence Length: 1015 aa Download sequence

MSEPEEEENQ TTFIPKSSTD KSSVDKDSLM DLDLDFDSSS WPFDQTSFCP RPSSPFFLSI  60
FSSTSSQNQN QQPQLPLVNV SSVEQQQPSS PLWVFSDGDD DKFGSALNGF SSLATSGASI  120
RISDYPKLIS RIPESMTVRT EDEKVCLPPT RVVPAESQDL SCVIKERITQ ALRYFKESTE  180
QTVLAQVWAP IKNGDRYVLT TSGQPFVLDP HSNGLLNYRT VSLMYMFSVD EENDGNMGLP  240
GRVFRQKLPE WTPNVQYYSK NEYPRLIHAL NYNVRGTLAL PVFEPSGQSC VAVIELILTS  300
QKVNYAPEVD KVCKALEAVN LKSSDILDNP NLQICNEGRQ LALAEILEIL NVVCEAHKLP  360
LAQTWVPCRH RSVLADGGGV KKSCSSFDGS CVGQVCMSTT DVAFYVVDAH MWGFRDACAE  420
HHLQKGQGVA GRAFASHSSC FSRDITQFSK TEYPLVHYSL MFGLMSCYAI CLRSSHTGSD  480
DYILEFFLPP SITDDGEQQD LLSSIMTSMK EHFRSLRVAT EHDVEDEKRF IEIVEPVIGE  540
KGVLNSEVFC GISPRGPDSL PNGLSKRKLM APYDGLSNGE NCTGVDGSNA SVSVPGNKGT  600
KKPTERRRGK TEKSISLEVL QQYFAGSLKD AAKSLGVCPT TMKRICRQHG ISRWPSRKIN  660
KVNRSLSKLK RVIESVEGGE GTFNLTSLST STPLSVAVGS ISWPVSLEGP KEQQSEFQGS  720
KENQSPTQMT LQSTFRGESG NRGVLLSHQE INHEQNGSHS KFRKGPNGSK SRSGSADGST  780
GNPASHGSSQ SSPANEIPPL NDFLVHSNQE QGLNIGNSLN VVFPQNGELN LTAAFSIPDA  840
LVATQQQLPQ PLGGMLVEDA GSSKDLSNLC SLAVEVESGL DDQVPDSSWM NPPVLDQTTY  900
QEMAPTRTMP HITATQDVRT ITIKATYRDD IIRFRLLLTS SLIELKEEVA KRLKLEVGTF  960
EIKYLDDDQE WVVLACDADL QECLEISRSS GKHMIRLLVH DMIANLGSSC ESSGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein