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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_026458753.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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| Family | GeBP | ||||||||
| Protein Properties | Length: 289aa MW: 33165.5 Da PI: 8.4264 | ||||||||
| Description | GeBP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | DUF573 | 51.3 | 3.4e-16 | 100 | 195 | 3 | 97 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfk.vsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskki 95
++rl s eDeiv+L Gl ++ +++g p ++f +++k+s++f+ v+ksq+v + +LKk+f k +k +++ +p+f+ ++d k + + k i
XP_026458753.1 100 ISRLISVEDEIVILEGLREW-KRKGWFPLLARQEFTDYIKDSLHFNpVNKSQVVRQVWQLKKRFCKFLEKkNDDDADPVFEDPNDYKLYLIMKDI 193
5799****************.77899******************9659****************9988874678899****************** PP
DUF573 96 Wg 97
Wg
XP_026458753.1 194 WG 195
*8 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 289 aa Download sequence |
MNHPSSCPED PPSAASSSEE EVENSKSEAS EKGEAGKEVE ISGSEASEGE AEDESDSEFV 60 ESSENHKRKR TKAANKPTSS SSSKSKSSNI VKKRRKRTPI SRLISVEDEI VILEGLREWK 120 RKGWFPLLAR QEFTDYIKDS LHFNPVNKSQ VVRQVWQLKK RFCKFLEKKN DDDADPVFED 180 PNDYKLYLIM KDIWGDEYPV IRKKNVKYDD DNGRKVKAKR ELLDKLPVLG IKDCVSEEGL 240 KLIGDAKVKK FEKKWKKLHQ EELHLNLKRK ELIEEMTQAL LAAVKASKD |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 92 | 96 | KKRRK |
| 2 | 92 | 122 | KKRRKRTPISRLISVEDEIVILEGLREWKRK |
| 3 | 93 | 123 | KKRRKRTPISRLISVEDEIVILEGLREWKRK |
| 4 | 94 | 124 | KKRRKRTPISRLISVEDEIVILEGLREWKRK |
| 5 | 214 | 221 | RKVKAKRE |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G61730.1 | 3e-07 | GeBP family protein | ||||
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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