PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026458975.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 267aa    MW: 30194.7 Da    PI: 4.2898
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026458975.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF64.31.3e-204185145
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    ++i++ks+ qvtfskRr+g++KKA ELSvL++ ++a+i fs+ g+
  XP_026458975.1 41 EKIKDKSKLQVTFSKRRKGLFKKATELSVLTGSQIALIAFSPAGR 85
                    579***************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MLPVVLLILF VTQLSVHESS NDDGDEKQRQ GGDGRKKIKI EKIKDKSKLQ VTFSKRRKGL  60
FKKATELSVL TGSQIALIAF SPAGRPYVCG NPDLILDRFL NNINGEAREI QKDDDEQQRR  120
CLEAERELEA EKKRGVLLGS LVNCDLGPDN DKFWWNTYVD GLSLDELVQM RSDMEQLQKC  180
VAQRSHDLQM TSNNTAASSS FSSYEDKSLA LMTIPSGNEI VDDDYQNEEM ANELLFDFDS  240
QECEFGIGNT TSTDEEITAD MFSDDYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.14e-15M-type_MADS family protein