PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026459109.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 238aa    MW: 27233.1 Da    PI: 9.7956
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026459109.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3512.6e-16135225199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k +++s+v++  +l lp  f++++  + +++ t+tl de g+++  ++   k++    l++GW +F+ a++L +gD +vF+l++ ++f  +++
  XP_026459109.1 135 FVKPMLHSHVNRGFWLGLPAYFCRKYL-P-KRDETITLVDEVGEEFPTNYLALKNG----LSGGWMGFALAHDLIDGDALVFQLVEPTKF--KIR 221
                     89************************5.3.35669***************777777....9**********************9876666..888 PP

                     EE-S CS
              B3  96 vfrk 99 
                     ++r+
  XP_026459109.1 222 IIRA 225
                     8876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MVKSKSPYEN LRLQRIEENK KRIEDLKFNH LAINFKNSSP NSSQVKQSKP RVLVQKKLEF  60
VQVRRSNRLS DKPAPVYEEV FVYEYARRRS INGFSKPRAI PLGDFPIATE IDRENATTKA  120
VNVEKDIGGD GFPCFVKPML HSHVNRGFWL GLPAYFCRKY LPKRDETITL VDEVGEEFPT  180
NYLALKNGLS GGWMGFALAH DLIDGDALVF QLVEPTKFKI RIIRANGSQE ERNGEESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.12e-50B3 family protein