PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026459485.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 165aa MW: 18874.3 Da PI: 10.1235

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026459485.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25	4.4e-08	6	52	3	47
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 rWT e d+l+ + + g ++++Ia++++ g++ ++ ++q + XP_026459485.1 6 RWTREQDKLFETGLVIYTEGtpdRFSRIAERVP-GKSVSEVHQHYQLL 52 8******************************.*********965 PP
2	Myb_DNA-binding	32.6	1.8e-10	98	142	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ ++ + ++ G g+W+ I+r + k Rt+ q+ s+ qky XP_026459485.1 98 PWTAQEHRDFLLGLTERGRGDWRGISRDFVKSRTPGQVASHAQKY 142 7*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence
MEGAARWTRE QDKLFETGLV IYTEGTPDRF SRIAERVPGK SVSEVHQHYQ LLVRDMLEIE 60 AGHVELPNYL DDFVLSSTNQ SGTTTSTSKA KERKIGIPWT AQEHRDFLLG LTERGRGDWR 120 GISRDFVKSR TPGQVASHAQ KYFIHINTKP NKKVRKRSSI HDTPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	8e-48	MYB family protein