PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026459907.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

LBD

Protein Properties

Length: 117aa MW: 13210.8 Da PI: 4.1258

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026459907.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	48	3.6e-15	1	56	45	100
DUF260 45 llkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +l++lp ++r++a++++ eA +r++dPvyG+vg+i++lqqq+ +++ela+++ e XP_026459907.1 1 MLQRLPVSQRSEAADCMSLEATWRVQDPVYGCVGIISQLQQQILMVQSELAKTQGE 56 7899***********************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 117 aa Download sequence
MLQRLPVSQR SEAADCMSLE ATWRVQDPVY GCVGIISQLQ QQILMVQSEL AKTQGEIAFH 60 NAQQQQQTQL AQEPIIGGTQ WLFQFGQPSS SSTNINVNQE DMISNLDQQP FLDFLNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26620.1	4e-18	LBD family protein