PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026459946.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 315aa MW: 36421.2 Da PI: 8.7573

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026459946.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.3	5.4e-16	39	84	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia ++ gR++k+c++rw++ XP_026459946.1 39 RGHWRPAEDSKLKELVALYGPQNWNLIAGKLE-GRSGKSCRLRWFNQ 84 899***************************.*********996 PP
2	Myb_DNA-binding	53.3	6.5e-17	91	134	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r+ +++eE+++l da++++G++ W+ Iar + gRt++++k++w+ XP_026459946.1 91 RKGFSEEEEQRLMDAHRLYGNK-WAMIARLFH-GRTDNSVKNHWHV 134 5669****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MECNNQNSRD LDAESHNYHH HHRYSVMSNN NGQSKLCLRG HWRPAEDSKL KELVALYGPQ 60 NWNLIAGKLE GRSGKSCRLR WFNQLDPRIT RKGFSEEEEQ RLMDAHRLYG NKWAMIARLF 120 HGRTDNSVKN HWHVIMARKY RERSSSSYRR RKSIPFFHES GGSYLGSPMN NNRFCEDHPH 180 SPPPPPPPPS RDFFSAPGQN QDMGSSFNHH ISRCTWEVQP RNDYCSNFMI PPTSTYYHDS 240 MHHHDLLQQE LQQYQQTTYS HSSSKTSTSH VSVSDHFQAS SSSSVDNNNN RVIATTYVDT 300 TITPPFIDFL GVGAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	6e-62	MYB family protein