PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026460007.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 612aa    MW: 69331.8 Da    PI: 8.3396
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026460007.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.64e-1713103299
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     fk+   ++v + +rl lpkkf++ +g  +e +k   +ed++g+ W v+l  r+ + ++++++GW+eF +   +  g f++F+++g+s+f  +v++
  XP_026460007.1  13 FKII-CNYVIEDRRLELPKKFVRLFG--EELGKAGLIEDPTGKIWPVEL--RRAKAEIYFQSGWQEFMEYFSISIGHFLIFRYEGDSQF--HVSI 100
                     5554.67999************8887..448888999************..**********************************9***..**** PP

                     E-S CS
              B3  97 frk 99 
                     +++
  XP_026460007.1 101 CDE 103
                     *96 PP
2B357.32.8e-18302401498
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE......EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr......yvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                     ++ +s+ +k + +++p +f++e+ ++k+++  +tl+d+ g++W+v +++rk + r        l kGW +Fv +n+Lk+gD +vF+l++ ++ e+
  XP_026460007.1 302 IMRQSYFSKGSPVYVPSEFTREF-LVKAGDNFVTLQDPAGKKWRVGYKFRKAGTRssaiktAELYKGWYRFVLENHLKVGDACVFELVDIDNLEM 395
                     567899999999********999.56778889*****************7766666555666677**********************9889**9* PP

                     EEEEE- CS
              B3  93 vvkvfr 98 
                     +v ++r
  XP_026460007.1 396 KVNIIR 401
                     *99987 PP
3B353.93.2e-17513606498
                     E-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   4 vltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     +++ps++ k +++ +p kfa+++        ++k +tl+d++g++ +v ++ + + +++ l +GW eFv +n+L +gD +vF+l++  + e++v 
  XP_026460007.1 513 IMKPSYTQKGRLVHVPMKFARDCllmA----GDKFVTLKDSTGKKRRVGYTTSPCASKVSLYNGWHEFVLENHLMVGDACVFELVDIANLEMKVN 603
                     6789999999999**********6542....5568***************88888888*************************998899999999 PP

                     EE- CS
              B3  96 vfr 98 
                     ++r
  XP_026460007.1 604 IIR 606
                     987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 612 aa     Download sequence    
MEKKKKMAGS YFFKIICNYV IEDRRLELPK KFVRLFGEEL GKAGLIEDPT GKIWPVELRR  60
AKAEIYFQSG WQEFMEYFSI SIGHFLIFRY EGDSQFHVSI CDETACEIEY PYHGEDVDES  120
VSEGVSLENM DVPFQSAACN ARAAANKTRP SCRGHDSASK RRFEDYQEAR GSVKRNRSDG  180
IEMNTSKQWV YNFRRQPELP IIISDDESDN DEGYQNPGDS ANVTNKTEQD RCKAQFVNSD  240
SECDDERPMP TQQRSASHKG KPKKASCGAR KLDVSRTKSQ RATRVIGEAR AFKSDFPMCM  300
IIMRQSYFSK GSPVYVPSEF TREFLVKAGD NFVTLQDPAG KKWRVGYKFR KAGTRSSAIK  360
TAELYKGWYR FVLENHLKVG DACVFELVDI DNLEMKVNII RVCVPCGKRH PEVVDTESSE  420
ENYQIPGKSA KHNDSEDIES DAGHTMPIQP KSARHGGNHK MSKTSEVKVH CPGKNASCAT  480
RNVGVTESES QRAMAVIKEA RAFKSDFPIC TIIMKPSYTQ KGRLVHVPMK FARDCLLMAG  540
DKFVTLKDST GKKRRVGYTT SPCASKVSLY NGWHEFVLEN HLMVGDACVF ELVDIANLEM  600
KVNIIRAFPD IV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-24B3 family protein