PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026460172.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 190aa    MW: 20523.3 Da    PI: 7.3339
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026460172.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260129.41.6e-40141131100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+l+rkC+++Cv+apyf +++ +kf  vhk+FGasnv+k+l ++p e+red+++slvyeAear+rdPvyG++g +  lq+q+ qlk++la
  XP_026460172.1  14 SCAACKYLKRKCTPNCVFAPYFKSDELHKFVKVHKVFGASNVSKILGEVPAEQREDTANSLVYEAEARLRDPVYGCIGALALLQNQMIQLKQDLA 108
                     6*********************************************************************************************9 PP

          DUF260  96 llkee 100
                       +++
  XP_026460172.1 109 ISRAH 113
                     98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MKKGQDCPAR PTPSCAACKY LKRKCTPNCV FAPYFKSDEL HKFVKVHKVF GASNVSKILG  60
EVPAEQREDT ANSLVYEAEA RLRDPVYGCI GALALLQNQM IQLKQDLAIS RAHLACYASD  120
TAPPPLQTPP PPPPSPLISG DYFVYGLLSS DEFTVYDPVS GGSTSNPNYS SDGQPHPYSG  180
ATPLSASFPQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11090.11e-52LBD family protein