PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026460217.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 316aa    MW: 36086.8 Da    PI: 10.5878
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026460217.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.41.1e-1224114199
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     ffk+++++ ++ +  + +p +f+e+   g++  +    + + +sg++W+v+l     +++y++ +GW++Fv +n +  +D++ Fk++++++    
  XP_026460217.1  24 FFKIFLSPESFYK--MKVPIEFLEQLtcGIP--G--SFSSRGPSGKVWRVRL--LEMGDGYYFIDGWEDFVIDNFMSNKDICAFKYVDENCL--Q 108
                     7788877777766..699999*998875433..4..48889***********..999999**************************998887..9 PP

                     EEEE-S CS
              B3  94 vkvfrk 99 
                     v++f++
  XP_026460217.1 109 VQIFER 114
                     999987 PP
2B342.31.3e-13240316482
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82 
                     ++ +s+v +  +l lp++f ++h     +s+++tl+d++g++W v+l +++  +   lt+GW++    n++++ D+++F
  XP_026460217.1 240 TMRKSHVYTGFCLPLPRSFWKAHLP--DCSQQMTLRDPRGKTWCVRLYVNQIHQVGQLTEGWRKISFTNNIEASDVCIF 316
                     577899*****************64..48999***************6677777788*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MVKKTRKTLT SKSSSSVTRR VPEFFKIFLS PESFYKMKVP IEFLEQLTCG IPGSFSSRGP  60
SGKVWRVRLL EMGDGYYFID GWEDFVIDNF MSNKDICAFK YVDENCLQVQ IFERNGCEKE  120
TAFKANCSQA STTNFAARHK VKKAVKNQGK FPIFKGRAST MNLSARCWGG KAVKNQGKFS  180
IIKGRGSTMN RSARYWGKKA VKNQGGPFIS QRRGITVEEE NMALNAALRF VSKKPYAMIT  240
MRKSHVYTGF CLPLPRSFWK AHLPDCSQQM TLRDPRGKTW CVRLYVNQIH QVGQLTEGWR  300
KISFTNNIEA SDVCIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-17B3 family protein