PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026460218.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 348aa MW: 40260.8 Da PI: 10.5197

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026460218.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	48.7	1.3e-15	24	114	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffk+++++ ++ + + +p +f+e+ ++ + l+ +sg++W+v+l +++y++++GW++Fv +n + +Df+ Fk++++++ v+ XP_026460218.1 24 FFKIFLSPESFYK--MKVPIEFLEQLTSE--IPGSFYLRGPSGKVWRVRL--LEMGDGYYFKDGWEDFVIDNFMSNKDFCAFKYVSENCL--QVQ 110 7888877777776..799***999655..4456***********..99999*************************987777..999 PP EE-S CS B3 96 vfrk 99 +f++ XP_026460218.1 111 IFER 114 9987 PP
2	B3	53.2	5.2e-17	244	334	4	98
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++ +s+v + +l lp++f ++h +s+++tl+d++g++W+v+l +++ + lt+GW++ n++++ D+++F+l++ +ef ++++fr XP_026460218.1 244 TMRKSHVYTGFCLPLPRSFWKAHLP--DCSQQMTLRDPRGKTWSVRLYVNQIHQVGQLTEGWRKISFTNNIEASDVCIFELVKPNEF--KLHIFR 334 577899***************64..48999***********6677777788**********************987888..777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MVKKTRKTLT SKSSSLVTKR VPEFFKIFLS PESFYKMKVP IEFLEQLTSE IPGSFYLRGP 60 SGKVWRVRLL EMGDGYYFKD GWEDFVIDNF MSNKDFCAFK YVSENCLQVQ IFERNGCEKE 120 SAFEANCSQA CTTNFSARHK VKKAVKNQGK FPIFKGRAST MNPSARCWGE KAVKNQGKFP 180 IIKGRASTMN RSARCWGKKA VKNQGERLGG PFISQRRDIT VKEENMALNA ALRFVSKKPY 240 AMITMRKSHV YTGFCLPLPR SFWKAHLPDC SQQMTLRDPR GKTWSVRLYV NQIHQVGQLT 300 EGWRKISFTN NIEASDVCIF ELVKPNEFKL HIFRVIEETV PLRRLRDM

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MVKKTRKTLT SKSSSLVTKR VPEFFKIFLS PESFYKMKVP IEFLEQLTSE IPGSFYLRGP  60
SGKVWRVRLL EMGDGYYFKD GWEDFVIDNF MSNKDFCAFK YVSENCLQVQ IFERNGCEKE  120
SAFEANCSQA CTTNFSARHK VKKAVKNQGK FPIFKGRAST MNPSARCWGE KAVKNQGKFP  180
IIKGRASTMN RSARCWGKKA VKNQGERLGG PFISQRRDIT VKEENMALNA ALRFVSKKPY  240
AMITMRKSHV YTGFCLPLPR SFWKAHLPDC SQQMTLRDPR GKTWSVRLYV NQIHQVGQLT  300
EGWRKISFTN NIEASDVCIF ELVKPNEFKL HIFRVIEETV PLRRLRDM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-23	B3 family protein