PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026460269.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 258aa MW: 29894.3 Da PI: 5.1127

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026460269.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.4	1.9e-14	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W +eEd+ll ++++ G g W+t++++ g+ R +k+c++rw +yl XP_026460269.1 15 RGPWKPEEDLLLTRYIETCGEGKWATVSKRSGLMRGGKSCRLRWKNYL 62 89********************************************97 PP
2	Myb_DNA-binding	50	6.9e-16	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++ E++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l XP_026460269.1 68 RGDMSEAEEDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 113 7899****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MESEGITKEE ELLNRGPWKP EEDLLLTRYI ETCGEGKWAT VSKRSGLMRG GKSCRLRWKN 60 YLRPNLKRGD MSEAEEDLII RMHKLLGNRW SLIAGRLPGR TDNEVKNYWN THLTKREIIQ 120 HAKPDVPMSK RRKLLDHSAD KDSTESTCDD QSPNSKTNDE SVNETERSTV NGVTDDESKV 180 TMSEVVSHSW MDHMKCGSNN DMQSHWFPMD GKFFDEPYLT SLDSMYFLDS YYGVGIENYS 240 WTESFTYGLD DLYPISYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	8e-59	MYB family protein