PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026460455.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 350aa    MW: 38977 Da    PI: 5.1311
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026460455.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.27.7e-08555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT+ E+  l  ++ ++G g W+ I +          R+  ++k++w++
   XP_026460455.1  5 KQKWTAAEEAALRAGILKHGLGKWRQILKDPEfsgilILRSNVDLKDKWRN 55
                     79***********************************56***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MGAPKQKWTA AEEAALRAGI LKHGLGKWRQ ILKDPEFSGI LILRSNVDLK DKWRNIQAPR  60
SFSSADRPDT LYRPETPDLS RARSGYEKSQ LKVEPYESPF ALSWEARSWE AQSDDDIVDV  120
KPIPVAVETL SESGSTQSNL RLDSLIIEAI ANLKERNGSN RTSIATYIED HYCAPPNFRR  180
ILSEKLKRFI ASGKLIKVNR NYRIASNSVS SVSFEKSKTC EMRLLEAKQD DSPNIDKEPE  240
RMVPEAKQDD SPNIVKEPER MVPEAKQDDS PNIDKDGDKI ITRTCINTEL AEMRFMTAQQ  300
AFAAAARAAA AADEWMAIAE QAAMEAEAAE ADAEAAMMTL RARNASVACA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.16e-52MYB_related family protein