PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026460855.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 280aa MW: 31362 Da PI: 7.1392

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026460855.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.8	3.4e-15	9	56	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed ll ++++q+G g W+ ++ + g +R++k+c++rw++yl XP_026460855.1 9 KGSWTEAEDNLLRKCIEQYGEGKWHQVPIRAGINRCRKSCRLRWLNYL 56 799***************************99**********97 PP
2	Myb_DNA-binding	39.6	1.2e-12	62	106	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg + ++E +l+ + +k+lG++ W++Ia +++ gRt++++k++w+++ XP_026460855.1 62 RGQFEPDEVDLIGRMHKLLGNR-WTLIAGRLP-GRTANDVKNFWNTH 106 78999***************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MDSPGGLRKG SWTEAEDNLL RKCIEQYGEG KWHQVPIRAG INRCRKSCRL RWLNYLRPCI 60 KRGQFEPDEV DLIGRMHKLL GNRWTLIAGR LPGRTANDVK NFWNTHFNNK RHISSDPIPG 120 VGGTRIRTLG KSSSTATIVI KPQAINFSRN SSWMGRKINM EHQIDQKRHH SAIDCSGKVS 180 IEYSFGDEAG SWCENNIMDS FTNGSSLFTK FCVNDGDDIN QTMVPAAIID EGEDNFNNDT 240 LGEGKSATST TAGSSTADTV DTFDDDFFLE DRIWGLLGPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	4e-61	MYB family protein