PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027060845.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 401aa MW: 45213.4 Da PI: 6.6992

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027060845.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	45.6	2.3e-14	86	164	1	78
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwev 78 +fYn YAk GF +rks+ k+ ++g r++vC +eg+r+e+ + ++++r+ +a trtgC a+++vk ++ + k++v XP_027060845.1 86 EFYNLYAKLSGFGIRKSNAKRD-EDGISRFRKWVCCCEGYRNEKWFNyEDRKREAKAITRTGCGACFRVKYDTeSVKYVV 164 6**************98887.8898999********9988767889999**************996667766 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MGQDGVLKTH DMVQEIEKGK MGMDGCGRLM SFDLNQEPEC DRDTCSEESG GSIGGHEDEE 60 ADELVGAIGV DDVMKLTFDT EEEAGEFYNL YAKLSGFGIR KSNAKRDEDG ISRFRKWVCC 120 CEGYRNEKWF NYEDRKREAK AITRTGCGAC FRVKYDTESV KYVVWSTITS EASVQHLRSH 180 RKVSDAEYAQ AKSLKLVGAR ICQIMKHFVI KAGGYSNVGF CIKDLYNRMD EERRKDIFNG 240 DAEGALGFLA AKKDADDMFF YKYHVDNEGR LARLFWADSK SRVDFSVFGD VLVFDTTYKT 300 NKYRKPLVVL AGVNNHLNST IFGCALLSDE RIETYEWVLS TFVEAMKGRK PVAVMTDGDS 360 AMRRAIKNLL RMLVTGYVRG TCIGMHGVIF AARSLITGCM T

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MGQDGVLKTH DMVQEIEKGK MGMDGCGRLM SFDLNQEPEC DRDTCSEESG GSIGGHEDEE  60
ADELVGAIGV DDVMKLTFDT EEEAGEFYNL YAKLSGFGIR KSNAKRDEDG ISRFRKWVCC  120
CEGYRNEKWF NYEDRKREAK AITRTGCGAC FRVKYDTESV KYVVWSTITS EASVQHLRSH  180
RKVSDAEYAQ AKSLKLVGAR ICQIMKHFVI KAGGYSNVGF CIKDLYNRMD EERRKDIFNG  240
DAEGALGFLA AKKDADDMFF YKYHVDNEGR LARLFWADSK SRVDFSVFGD VLVFDTTYKT  300
NKYRKPLVVL AGVNNHLNST IFGCALLSDE RIETYEWVLS TFVEAMKGRK PVAVMTDGDS  360
AMRRAIKNLL RMLVTGYVRG TCIGMHGVIF AARSLITGCM T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-48	FAR1 family protein