PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027062379.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 315aa MW: 35860.8 Da PI: 8.1853

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027062379.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.7	5.6e-50	11	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhP+deel+++yL k+v+ + + + evd++k+ePwd+p+++ + ke+yf+s+rd+kyatg r+nrat sgyWkatgkd++vl+ XP_027062379.1 11 LPPGFRFHPRDEELICDYLMKRVACCDQPP--LMIEVDLNKCEPWDIPENACVGGKEYYFYSQRDRKYATGLRTNRATLSGYWKATGKDRPVLR- 102 79*******************9988666..6899********7777789**********************************9. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 kg+lvg++ktLvfy+grapkg+ktdWvmhe+rle XP_027062379.1 103 KGTLVGMRKTLVFYQGRAPKGRKTDWVMHEFRLE 136 999**************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MMNLSMVEAK LPPGFRFHPR DEELICDYLM KRVACCDQPP LMIEVDLNKC EPWDIPENAC 60 VGGKEYYFYS QRDRKYATGL RTNRATLSGY WKATGKDRPV LRKGTLVGMR KTLVFYQGRA 120 PKGRKTDWVM HEFRLEGPFG PPKLSSLKQE DWVLCRVFFK NRDNNIIAAK QGMDMNSYDG 180 ETSPSPLPPL MDPYFKFGQT QTNTNEHEQV PCFSIFSPDQ ANNNSQPFSY LAHMDVPSFS 240 TKNMPTFNFG GIPDFGAYFS SSCREQKVIK AVLNQLTRME NASPNVKGSP SFGEASTSDS 300 FLSEVALSTM WNNQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56010.2	1e-111	NAC family protein