PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027062761.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 343aa    MW: 37233.1 Da    PI: 5.1054
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027062761.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.93.9e-16188229247
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaai 47 
                     ++kGVr+++  g+WvAeIrdp     +  ++++lg+f +aeeAa+a++
  XP_027062761.1 188 HFKGVRQRS-AGKWVAEIRDP-----HqgRSVWLGTFTSAEEAARAYD 229
                     69****999.8*********7.....336******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MKIIFAASTV ALQTPPQLIH SSLTPTLKPG TRHSTRTQSL LELSMDECGL TCYALNSTLS  60
RIRSDNCSLS VSLYSKFSDQ TSEELFKDEV DKCIISALQH VISNTEAAAP PTAPAHQQQP  120
TVMPEFEGVT SLSQSSATAS SGLGSSSTGT MMEDNDDQSR NDEKQKQKNK KKKKKKREVE  180
LDGEKRVHFK GVRQRSAGKW VAEIRDPHQG RSVWLGTFTS AEEAARAYDG KCIQFRGDRA  240
KTNFPSSDYA NANDDQSSGS QQQQQEGDAP PPAAALLSVN APAVYTSPLI TKTTASASTT  300
NSTTTAADAG ATSWEEDEDF WDLFQILSDT DWTMLDSPPP SGP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1170176KKKKKKK
2171177KKKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.17e-22ERF family protein