PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027063155.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 311aa    MW: 34312.1 Da    PI: 4.7894
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027063155.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.16.1e-15951351356
             AP2  13 grWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     g+WvAeIr p++   rkr +lg+f+taeeAa a+++ + +l+ge
  XP_027063155.1  95 GKWVAEIRLPRN---RKRLWLGTFDTAEEAALAYDREAFRLRGE 135
                     9********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MEDASLPEGD HYADDRDNLN FSKREGTCER SSPKDSYIGQ ASQEDPKPRS NFQSSSNIPK  60
NTHAFSIFKE LLQDWKDTLA LSPGGRSAAT ATALGKWVAE IRLPRNRKRL WLGTFDTAEE  120
AALAYDREAF RLRGENARLN FPHLFRGSEA ACQMEAQEVS GTSSLSSSSI ANETSKLNKF  180
QMPNKQGVVV PSTNGNKTSI ITEYTEKGFE YKSSFHESRS EDIILAADNQ AGRMSIPPEQ  240
GLQGFSDPIM WGRSMTEVLT TTIQGSSSGF PIPSSPMWEN ITMADLLQQS DGYCLTENSC  300
AVLDVQMPSI P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.11e-26ERF family protein