PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027063176.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 291aa    MW: 32029.6 Da    PI: 8.6108
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027063176.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.3e-1983131355
             AP2   3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa++ l+g
  XP_027063176.1  83 FRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARTLRG 131
                     8*******.**********883....5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MNIHSGWLVN DRVKSQSERE KGSKIKEIFD LFSFSFRSFV CNFVVNLTFG HARGRAAAVA  60
KQAAAAAAAG ETNGSGGSKE IRFRGVRKRP WGRFAAEIRD PWKKTRVWLG TFDSAEDAAR  120
AYDAAARTLR GPKAKTNFPL PSTSSYHHPH QFSNYQNPNN PNFNNNDPAM FIDHPQNRLY  180
HQEPHQILHP QRPTSSSLSS TVESFSGPRP QTTAAAATSM IPSSSRRHPR SPPVVPDDCH  240
SDCDSSSSVI DDGDCDIASS SFRKPPLPFD LNLPAPVDVD ADDLHCTALC L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.11e-31ERF family protein