PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027063196.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 147aa    MW: 16964.4 Da    PI: 8.5877
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027063196.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR161.13.4e-1970146178
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwev 78 
                     +fY++YAk  GF +r sk +k k+++ + +r f+Cs+egkr ++k++    + +r+etr++C a++k++ ++ gk++v
  XP_027063196.1  70 NFYQKYAKASGFGTRLSKGHKDKNSDMMLDRVFCCSREGKRPKDKHN-MVVKCPRPETRCDCGARMKISCRQAGKYRV 146
                     6******************************************9999.9999************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MENDLPTHEI QSYRKLDFED VDWQEINDNA LPLYITDGNQ GNQIFLPLAI PDDLVRKLGM  60
EFVTEVAARN FYQKYAKASG FGTRLSKGHK DKNSDMMLDR VFCCSREGKR PKDKHNMVVK  120
CPRPETRCDC GARMKISCRQ AGKYRVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.29e-13FAR1 family protein