PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027063385.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 220aa    MW: 23493.2 Da    PI: 8.836
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027063385.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.64.9e-212473255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +gr++AeIrdps+   + r++lg+f+taeeAa+a++aa+++++g
  XP_027063385.1 24 HFRGVRKRP-WGRYAAEIRDPSK---KSRVWLGTFDTAEEAARAYDAAAREFRG 73
                    69*******.**********965...6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MAMKEKSKDV KPSTGKANAV KEVHFRGVRK RPWGRYAAEI RDPSKKSRVW LGTFDTAEEA  60
ARAYDAAARE FRGPKAKTNF PSPSEIQSPS NSSTVESSSG DGSTHAPVEL DLTRRLGVAA  120
GGGGAGSEIP ILHHPQAMAV LPNGQPVVFF QPMALNRADY PYRFGPVAMD YANVVGRGRG  180
AVHSDSDSSS VVDDNISDGD NMKRGGGLDL DLNFPPPVEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.12e-22ERF family protein