PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027063540.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 156aa    MW: 17471.3 Da    PI: 6.8128
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027063540.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.84.1e-211364256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+G+r+++ +g+++AeIrdp+ ng  +r +lg+f+taeeAa+a+++a+ +l+g+
  XP_027063540.1 13 KYRGIRRRP-WGKYAAEIRDPTRNG--ARLWLGTFDTAEEAARAYDRAAYALRGH 64
                    8********.**********98887..**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MENDQEKGKK VIKYRGIRRR PWGKYAAEIR DPTRNGARLW LGTFDTAEEA ARAYDRAAYA  60
LRGHQALLNF PNDGHYRNAD PAGSSLDFSQ LPSSSSMNLP NSGGAGAPVE TPELEASPRG  120
QEEQVIELEY LDNKLLEDLL GSQFQRQDHS KRPKLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.11e-27ERF family protein