PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027063813.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 317aa    MW: 35915.4 Da    PI: 8.6566
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027063813.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM164.63.6e-51241513128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 
                     pGfrFhPtdeelv +yL++kve+k+++l e ik++diyk++PwdLpk+ + ++kewyfF+kr +ky+++ r+nr+t sg+Wkatg d++++s+  
  XP_027063813.1  24 PGFRFHPTDEELVGFYLRRKVEKKPISL-ELIKQIDIYKYDPWDLPKASTVGDKEWYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDRPIYSAgg 117
                     9***************************.99***************888889****************************************965 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++  +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  XP_027063813.1 118 eGRDCIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 151
                     55555***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MEMETMSSVV TTNSKDEDDD VPLPGFRFHP TDEELVGFYL RRKVEKKPIS LELIKQIDIY  60
KYDPWDLPKA STVGDKEWYF FCKRGRKYRN SIRPNRVTGS GFWKATGIDR PIYSAGGEGR  120
DCIGLKKSLV YYRGSAGKGT KTDWMMHEFR LPAEHDNIKS TKHIDAKNIA QEAEVWTLCR  180
IFKRNVSYRK CMPDWKEISG KRLSNAVDAS SKTCSMEFDN VTQSYISFSA NVAPAITRQN  240
DKKPSINNNN NSVHGLGHVD ITNQLLMSQL SSFSQAPSST TASYASFASS DATDFLKHGD  300
WDELRSMVEF GAGPTFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.15e-95NAC family protein