PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027064307.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 241aa    MW: 26222 Da    PI: 8.2468
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027064307.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.49.8e-203381355
             AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa++ l+g
  XP_027064307.1 33 FRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARTLRG 81
                    8*******.**********883....5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MPRGRAAAVA KQAAAAAAAG ETNGSGGSKE IRFRGVRKRP WGRFAAEIRD PWKKTRVWLG  60
TFDSAEDAAR AYDAAARTLR GPKAKTNFPL PSTSSYHHPH QFSNYQNPNN PNFNNNDPAM  120
FIDHPQNRLY HQEPHQILHP QRPTSSSLSS TVESFSGPRP QTTAAAATSM IPSSSRRHPR  180
SPPVVPDDCH SDCDSSSSVI DDGDCDIASS SFRKPPLPFD LNLPAPVDVD ADDLHCTALC  240
L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.15e-32ERF family protein