PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027065422.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 178aa    MW: 19208.3 Da    PI: 8.8786
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027065422.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.78e-202474256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +ykGVr +k +g+WvAe+r p++   r r++lg++ taeeAa+a++aa+ +l+g+
  XP_027065422.1 24 RYKGVRMRK-WGKWVAEVRQPKS---RDRIWLGSYQTAEEAARAYDAAAFCLRGP 74
                    7******99.*******999854...4*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MVRPQSRREN GGTSRSDGIN NSRRYKGVRM RKWGKWVAEV RQPKSRDRIW LGSYQTAEEA  60
ARAYDAAAFC LRGPSVMLNF PDDPPRIPAA GELSATQIQV AASRHARSRR VEEDALGDGN  120
EEVGVEGGFL QGCSDFGGFL KNGFCERGGE RDDSGGSGGG SAGMSSATIF GTPALWSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.13e-26ERF family protein