PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027067811.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 155aa    MW: 17952.7 Da    PI: 9.8394
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027067811.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR160.26.5e-191198189
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89
                    kfYn+YA ++ Fsv k++ +k+ ++g +t r+  C keg +++ +++ +  +rtr+  ++gC+ak+++ + + + k++v++l+leHn el
  XP_027067811.1 11 KFYNKYAFKMSFSVHKNYLNKN-KDGVTTFRRCSCCKEGVKRKYESD-VMPKRTRVLMKIGCEAKMVIVLLRgTMKYHVHDLVLEHNREL 98
                    6*******************99.8899***************99999.999*****************99998**************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MEFNSKNDAY KFYNKYAFKM SFSVHKNYLN KNKDGVTTFR RCSCCKEGVK RKYESDVMPK  60
RTRVLMKIGC EAKMVIVLLR GTMKYHVHDL VLEHNRELHI AQCSHMMPSQ RKASDPQGFQ  120
TEISEDAGSL KQSHEFIRKE AGGMGNVGYT WDGLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-13FAR1 family protein