PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027068259.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 637aa MW: 73621.5 Da PI: 7.6331

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027068259.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.6	9e-23	21	108	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+Y+ vGFsvrk++ +k ++g +t+++++C keg++ + k + +k +rtraet+tgC+ak+ + +++ + k++v + + eHnH+l XP_027068259.1 21 NFYNRYGLVVGFSVRKDYLNKD-KDGVVTSKRYTCCKEGFKPRYKGD-VKPKRTRAETKTGCEAKMGIILNReTMKYQVRDQVIEHNHTL 108 6***************9998.8999**********999988.9***************999989************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 637 aa Download sequence
MEEALCPKIG MEFQSEDEAY NFYNRYGLVV GFSVRKDYLN KDKDGVVTSK RYTCCKEGFK 60 PRYKGDVKPK RTRAETKTGC EAKMGIILNR ETMKYQVRDQ VIEHNHTLHI SECAHMMRSQ 120 RKVSISQGTQ AEIANDAGIS LKQSHELMGK EAGGLGNIGY THDDLKRYLR AKRERGLKYG 180 EAGAMLLYFE EQKLEIPSFF HVEQLDCEEQ ITNIFWADAS MLMDYTYFGD VITFDTTYKT 240 NKEYRPLGVF VGFNQFRQLV IFGATLLYDE TIESFKWVFS TFVETDCGRH PKTIFTDQDA 300 AMAAAISAVM PSTYHGLCTF HIIVNFMKHL GNYYKDGSNL PYRFVECMYE IEDENEFIMA 360 WDAMLKEHKL ETNEWLCGIY ACRKKWAKCF MKGAWTAGMR NTQLSESLNA SIKNYLKLDH 420 DLVQFFKHFN RVVDEKRYNE LRIEYHSRQK LPMLGLQQTP VLIQAVSIYS PCMFVAFQNE 480 YDESTIMVIL DQKHTTMHVE YSVSHYDGGR ERRVILNPIT KDITCSCNLF EQEGILCSHA 540 LKVYDMVGTK FIPNQYVTKR WTKKARSGGR INCKGREISL DPSLSISHRY RLLAPEMVRL 600 ATRAAMSEAA TKLVSSAMSE LSKRVEMLFC GEIDEIT

Sequence ? help Back to Top

Protein Sequence Length: 637 aa Download sequence

MEEALCPKIG MEFQSEDEAY NFYNRYGLVV GFSVRKDYLN KDKDGVVTSK RYTCCKEGFK  60
PRYKGDVKPK RTRAETKTGC EAKMGIILNR ETMKYQVRDQ VIEHNHTLHI SECAHMMRSQ  120
RKVSISQGTQ AEIANDAGIS LKQSHELMGK EAGGLGNIGY THDDLKRYLR AKRERGLKYG  180
EAGAMLLYFE EQKLEIPSFF HVEQLDCEEQ ITNIFWADAS MLMDYTYFGD VITFDTTYKT  240
NKEYRPLGVF VGFNQFRQLV IFGATLLYDE TIESFKWVFS TFVETDCGRH PKTIFTDQDA  300
AMAAAISAVM PSTYHGLCTF HIIVNFMKHL GNYYKDGSNL PYRFVECMYE IEDENEFIMA  360
WDAMLKEHKL ETNEWLCGIY ACRKKWAKCF MKGAWTAGMR NTQLSESLNA SIKNYLKLDH  420
DLVQFFKHFN RVVDEKRYNE LRIEYHSRQK LPMLGLQQTP VLIQAVSIYS PCMFVAFQNE  480
YDESTIMVIL DQKHTTMHVE YSVSHYDGGR ERRVILNPIT KDITCSCNLF EQEGILCSHA  540
LKVYDMVGTK FIPNQYVTKR WTKKARSGGR INCKGREISL DPSLSISHRY RLLAPEMVRL  600
ATRAAMSEAA TKLVSSAMSE LSKRVEMLFC GEIDEIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-97	FAR1 family protein