PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027068513.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 146aa    MW: 16992.4 Da    PI: 8.1289
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027068513.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.94.5e-201198189
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89
                    kfYn+Y  ++ Fsvrk++ +k  ++g +t r++ C keg +++ + + +  +rt+a t+tgC ak+ + + + + + +v++l+leHnHel
  XP_027068513.1 11 KFYNKYTFKMDFSVRKDYLNKD-KDGVTTFRRYSCCKEGVKRKYEGD-VMPKRTQAPTKTGCGAKMIIVLFRgTMQCRVHDLVLEHNHEL 98
                    6*****************9998.8899****************9999.9999*****************99989***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MEFNSEEDAY KFYNKYTFKM DFSVRKDYLN KDKDGVTTFR RYSCCKEGVK RKYEGDVMPK  60
RTQAPTKTGC GAKMIIVLFR GTMQCRVHDL VLEHNHELHI AQCSHMLTSQ RKVSEAQGLQ  120
TEISEDAWFS LKQSHELMEK EACGMG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.29e-11FAR1 family protein