PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027069449.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 253aa    MW: 27160.7 Da    PI: 4.9
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027069449.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.5e-194191256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                     ykGVr++  +g+WvAeIr+p   + +  r +lg+f+t  eAa a++aa+ kl+ge
  XP_027069449.1 41 TYKGVRQRT-WGKWVAEIREP---N-CgSRLWLGTFDTSHEAAIAYDAAAYKLYGE 91
                    69****999.**********8...3.57*************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MEADGSANGN GNGRQGKKPA NASSRKGCTR GKGGPENASC TYKGVRQRTW GKWVAEIREP  60
NCGSRLWLGT FDTSHEAAIA YDAAAYKLYG EAAKLNLPHL FGRAQNIPDY FTLNTSGGNE  120
SGVQPVPFQQ NSLLNFASSS SSSYPVPQYQ GNEGLFFEMN PNAAATGYPT GTATVGITSV  180
IHDNTNVIHD NGNEAVRSEE TPMKEVWNSL KSNLPETDDS AIWAEAQAAS PFQVAMNDPG  240
IFDGNLDGNY PWN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.17e-37ERF family protein