PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027069829.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 324aa    MW: 34818.9 Da    PI: 5.7061
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027069829.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2552.1e-1783133155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr +  +g+Wv+eIr+p++   + r++lg+f  +e+Aa+a++ a+++++g
  XP_027069829.1  83 PVYRGVRMRA-WGKWVSEIREPKK---KSRIWLGTFACPEMAARAHDVAALSIKG 133
                     68*****998.**********854...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MAEPPHSETE SSSHSGTLDS AHMHHHRKRG RDDNNTTTTT TSAASRSNND NDTDRSSKNS  60
NSRSQTRNNS NNNNNNNSSS KHPVYRGVRM RAWGKWVSEI REPKKKSRIW LGTFACPEMA  120
ARAHDVAALS IKGNSAILNF PELAGSLPRP ATCSPPDVQA AALKAAQMDF QMDGRAKPGD  180
ESSHSQSSES SSSRVMTPCL SSMTGSSSSS SLLSSVTSSS PSSCTEEVST AAQASEAAAA  240
EELCEIVELP SLGASYDSVE SAREELVFMD SVDNMGWDYG HPWLHGSVET YGYFGENHAG  300
LMGMAEVDNP VVSGSFEGLL WQLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.14e-47ERF family protein