PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027070027.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GATA
Protein Properties Length: 258aa    MW: 28430.4 Da    PI: 10.5538
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027070027.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.12.8e-19122155134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C+ C+ttkTplWR+gp g+k+LCnaCG+++rk +
  XP_027070027.1 122 CADCNTTKTPLWRSGPKGPKSLCNACGIRQRKAR 155
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MLKCTSSSTN NRLKIMLHTL RSQDPEKKAN KGSKISLWKN NTNGNQADDH EEINPVNNKW  60
VSSKVKLMQK MNKPDLKEIT SSTTTAMKFE DHQKQPTSAS PEADHFSSNS SSNISNTPIR  120
VCADCNTTKT PLWRSGPKGP KSLCNACGIR QRKARRAMAA AAAAANGTSP PTYDTTAPLK  180
VKVQNKDKLK SNGQFKKRCK LNTSAESSQN LHAVQKKSGF EDFLFNLSKN LAFHRVFPQD  240
EKEAAILLMA LSCGLVHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.13e-37GATA family protein