PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027070675.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 204aa    MW: 21366.8 Da    PI: 5.5306
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027070675.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-192978355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    y+GVr++k++g+Wv+eIr+p     r   r++lg+f t+e+Aa+a++ a+++l+g
  XP_027070675.1 29 YRGVRRRKSSGKWVSEIREP-----RtpNRIWLGTFPTPEMAAAAYDVAALALKG 78
                    9******************9.....4478***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MSSSSSGTSS GNSGSSTSQA PLPGRRPMYR GVRRRKSSGK WVSEIREPRT PNRIWLGTFP  60
TPEMAAAAYD VAALALKGPE AELNFPNSAS SLPAPASASP RDIQAAAASA AAAAGAAMDA  120
LAGNAAALHA MNHALADKTE THISPTPPDH QKDHEFIDED LIFDMPNVLT NMAEGMLLSP  180
PRLDIAGDET STESMGAHDL WNHP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.13e-21ERF family protein