PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027071689.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 423aa    MW: 48432 Da    PI: 6.1364
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027071689.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM108.57.6e-34682191128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.............................kvkaeekewyfFskrdk 66 
                     +p+G+rF Ptdeel+v+yL+k++++ +l+l + i+e+++y ++P++L +                             +  ++ + wyfF+   +
  XP_027071689.1  68 MPRGYRFCPTDEELIVHYLRKRIAKAPLPL-NRIHEANVYGHNPQELTMtvdhentiiiemrfgvrgflidahryisdS-IHNVNGWYFFTYLTN 160
                     699***************************.77**************8558999********99999999888765532.23677********** PP

             NAM  67 kyatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ky++g+r++r   + g+Wk tgkdk+++  +g++vg +k+L f       gekt W mheyr+
  XP_027071689.1 161 KYPKGSRPSRsCGDGGFWKPTGKDKKIYY-NGNTVGYRKSLDFLL---GPGEKTAWKMHEYRI 219
                     **********666799*************.999***********5...45678********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    
MDNHQQQREE QPYLLHDHLL HHHWPPLQGQ QQQPLQHQHQ LYPLNDQQQP VPQGIILHEN  60
SQNFLDSMPR GYRFCPTDEE LIVHYLRKRI AKAPLPLNRI HEANVYGHNP QELTMTVDHE  120
NTIIIEMRFG VRGFLIDAHR YISDSIHNVN GWYFFTYLTN KYPKGSRPSR SCGDGGFWKP  180
TGKDKKIYYN GNTVGYRKSL DFLLGPGEKT AWKMHEYRIH ANNPRYKSSD PVLCRLYMNI  240
RRKNKDESEG DTVELMRENL DQCFTVNEAP MQNEDNDLAV GNISSAGSTN NQCMEYITST  300
LDTGGDAISN QVIYDLSSFQ FPDHPFQDFQ GYTNSHGGLE AITQEFTEPF HLSKGTMMPS  360
NLSMEPFHLS RGTMIPSDLN MEDVSKYAIG GTDLSDLAWQ NGCAGGYVNM TSLQIDGENS  420
GNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.11e-29NAC family protein