PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027071967.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 631aa MW: 73166.9 Da PI: 8.4919

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027071967.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.2	1.4e-23	26	113	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+YA ++GFsvrk++ +k ++g +t+r++ C keg +++ + + + +rtra t+tgC ak+++ + + + k++v++l+leHnHel XP_027071967.1 26 QFYNKYAFKMGFSVRKDYLNKD-KDGVTTSRRYSCCKEGVKRKYEGD-VMPKRTRAPTKTGCGAKMVIVLFRgTMKYRVHDLVLEHNHEL 113 6***************9998.8999************9999.999***************999**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 631 aa Download sequence
MDCSKLAEDG TPELGMEFNS EEDAYQFYNK YAFKMGFSVR KDYLNKDKDG VTTSRRYSCC 60 KEGVKRKYEG DVMPKRTRAP TKTGCGAKMV IVLFRGTMKY RVHDLVLEHN HELHIAQCAH 120 MMPSQRKVSE TQGFQAEISE DAGLSLKQSH ELMGKEAGGM GNVGYTREDL KRYLRTRRER 180 SLKYGEAGSM LNYFQEQTLE NPSFFHAVQL DCEEQITNIF WADAGMLIDY KFFGDVVTFD 240 TTYKTNKEYR PLGVFVGFNQ HRQIVIFGAA LMYDETIDSF KWVFGTFLAA MCGKRPSTIL 300 TDQDHAMAAA LSVVMPETFH GLCTFHIRRN FMKHLGNHYK ENSDLPYMFG ACMYEFEEVE 360 QFNRVWEAMV KKHNLENNEW LFGLYRIRDK WARCMMKERW TAGMRSTQLS ESLNAAIKNH 420 LKLDHDLVQF FRHFNRVVDE KRHNELIAEY EMRQKLPMVG LRQTPMLVHA SEMYSPTVFV 480 AFQNEYGEST AMVILRQQDA AMFVEFAVMR YDGGPERTVV FNRNDLSVRC SCKKYENEGI 540 LCGHALKVFD TVGIKIIPPE YIKRRWTKRA RAGDCFDRRG QEVVADPKVM ISTRYRELAP 600 AMIKVATRAA MSEDTSKVAI TVISDFSRKR H

Sequence ? help Back to Top

Protein Sequence Length: 631 aa Download sequence

MDCSKLAEDG TPELGMEFNS EEDAYQFYNK YAFKMGFSVR KDYLNKDKDG VTTSRRYSCC  60
KEGVKRKYEG DVMPKRTRAP TKTGCGAKMV IVLFRGTMKY RVHDLVLEHN HELHIAQCAH  120
MMPSQRKVSE TQGFQAEISE DAGLSLKQSH ELMGKEAGGM GNVGYTREDL KRYLRTRRER  180
SLKYGEAGSM LNYFQEQTLE NPSFFHAVQL DCEEQITNIF WADAGMLIDY KFFGDVVTFD  240
TTYKTNKEYR PLGVFVGFNQ HRQIVIFGAA LMYDETIDSF KWVFGTFLAA MCGKRPSTIL  300
TDQDHAMAAA LSVVMPETFH GLCTFHIRRN FMKHLGNHYK ENSDLPYMFG ACMYEFEEVE  360
QFNRVWEAMV KKHNLENNEW LFGLYRIRDK WARCMMKERW TAGMRSTQLS ESLNAAIKNH  420
LKLDHDLVQF FRHFNRVVDE KRHNELIAEY EMRQKLPMVG LRQTPMLVHA SEMYSPTVFV  480
AFQNEYGEST AMVILRQQDA AMFVEFAVMR YDGGPERTVV FNRNDLSVRC SCKKYENEGI  540
LCGHALKVFD TVGIKIIPPE YIKRRWTKRA RAGDCFDRRG QEVVADPKVM ISTRYRELAP  600
AMIKVATRAA MSEDTSKVAI TVISDFSRKR H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-111	FAR1 family protein