PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027072587.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 305aa    MW: 33799.6 Da    PI: 6.0812
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027072587.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.21e-183584255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  XP_027072587.1 35 KYVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 84
                    8********.7*********32...35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MEIHFQQPEQ EFAIPVSKMS NKLKGRSRSS GQNNKYVGVR QRPSGRWVAE IKDTTQKIRM  60
WLGTFETAEE AARAYDEAAC LLRGSNTRTN FVPQHISPDS PLASRIKNLL NKRKNDKGPQ  120
SNTDVHESSG AAPSPANSIN VNNCITSSSN SAASSPASSS GDSSSIDSVI SFEQKTPEGH  180
LFDDAYKPDL SNCCAKGFEM EMGPSYHDQT HMPSSGLQAQ GFDHRFAFST THDHHQLLEL  240
PKLNESGLPE IANHHMELSE FERMKVERQI SASLYAMNGV QEYMETVLDP IEALWDLPPL  300
CSLLC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-28ERF family protein