PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027073001.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

TCP

Protein Properties

Length: 230aa MW: 24723.9 Da PI: 6.9614

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027073001.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	109.4	5.3e-34	67	134	6	73
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73 ++ +++hTkv+gR+RRvR++a+caar+F+L++eLG+ +d++tieWLl+qa+pa+ ++tg+++ +++ + XP_027073001.1 67 KKPKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPAVVAATGSGTFPKTMV 134 6789********************************************************76666332 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MVLHPRTNGS HSQAKDNVPD PDLSATSPDL QLLSSVAAGA AADDDTANAS SLSIIEQQQP 60 EQPVPPKKPK DRHTKVNGRG RRVRMPALCA ARIFQLTREL GHRSDGETIE WLLRQAEPAV 120 VAATGSGTFP KTMVTSVGSL PTSHLSESTY ATVTRVHPSA VVIPGMGGFF AVPPPPMCRL 180 DLRQPPPTEL SGGINAYSQM PYTALLLEPS PRGEEHAESS AKNRDDFWHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37000.1	1e-36	TCP family protein