PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027073215.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 138aa    MW: 14741.9 Da    PI: 10.9535
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027073215.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.82.3e-172068355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ykG+r +k +g+WvAeIr+p   +kr r++lg++ t+  Aa+a++ a  +l+g
  XP_027073215.1 20 YKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSTPVAAARAYDTAVYYLRG 68
                    9*****99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    
MEGGGGIGAG AGKKKSERLY KGIRMRKWGK WVAEIREPNK RSRIWLGSYS TPVAAARAYD  60
TAVYYLRGPT ARLNFPELLV GDTTAANGGD LSAAAIRKKA IEVGSRVDAV QVPSPPMTTT  120
TTAAATTTAT MTMQHRLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23340.11e-48ERF family protein