PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027073645.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 194aa    MW: 22069.5 Da    PI: 5.167
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027073645.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.56.9e-1861111255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y GVr ++ +g+++AeIrd + ng   r++lg+f taeeAa a+++a+++ +g
  XP_027073645.1  61 HYIGVRKRP-WGKYAAEIRDSTRNG--MRVWLGTFATAEEAALAYDQAALSVRG 111
                     799******.**********44465..***********************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MNFRMESSWM EDEDQDFWNT IDGVFKSSWE TSCSSSKNNS GEYSIFFTTS IQQEPAEKEK  60
HYIGVRKRPW GKYAAEIRDS TRNGMRVWLG TFATAEEAAL AYDQAALSVR GPTTALNFPI  120
EKVQESLRNM VICSYQDGSS PVEALKEAHR MRNTASKRRG KGKQVKQEDV LVFEDLGSDL  180
LDELLSETNN SRSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.13e-32ERF family protein