PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027073683.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 322aa MW: 37373.4 Da PI: 6.2715

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027073683.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.5	1.8e-51	19	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lp+GfrFhPtdeelv++yL++k++++++++ +i+e+d+yk++Pw+Lp+++ +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + XP_027073683.1 19 LPAGFRFHPTDEELVMHYLCRKCAAQPISA-PIIAEIDLYKFDPWELPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGK- 111 799***********************99.88***********7666789*********************************98. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ g+kk Lvfy g+apkg kt+W+mheyrl XP_027073683.1 112 -PKALGIKKALVFYAGKAPKGIKTNWIMHEYRL 143 .778*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MEYRGQRRTM DGADLELSLP AGFRFHPTDE ELVMHYLCRK CAAQPISAPI IAEIDLYKFD 60 PWELPEMALY GEKEWYFFSP RDRKYPNGSR PNRAAGTGYW KATGADKPIG KPKALGIKKA 120 LVFYAGKAPK GIKTNWIMHE YRLANVDRSA GKRNNLRLDD WVLCRIYNKK GTLEKYNNVD 180 QKALLSSQEE MEEQKPKNLI SFEQNGIVTT EAKKMQQLQQ NTIMAQQMMN DYLHFETSES 240 APRLHTDSSG SEQILSPEVL SPEFAHEREV QSAPKWSDLE RALDFQFTMD GFQDDPFVSN 300 QMQYNDQVYP FQDMFLYMQK PF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	1e-124	NAC family protein