PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027074363.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 405aa    MW: 43110.5 Da    PI: 6.5216
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027074363.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.11.4e-20181230255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa+a+++a+++++g
  XP_027074363.1 181 RYRGVRRRP-WGKWAAEIRDPY----KaARVWLGTFDTAEAAARAYDEAALRFRG 230
                     7********.**********76....35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    
MCVFEVANSG KRARGENRGG DGEKSLLESL VSPMLSGFNR EQENSAIVSA LARVVAGEAE  60
DIDQELVVMN QGDGGGVVGG YYGAAASSNG DSSSPSACSS WGGGVGEKRG RPELNPDVGL  120
SESVSAVCWA FNDRPPVGSN LGSGVESSLM RTSMAATGAT YTYAATNTNS TEPYTGEPKR  180
RYRGVRRRPW GKWAAEIRDP YKAARVWLGT FDTAEAAARA YDEAALRFRG NKAKLNFPEN  240
VTLLPSSASS TSSSSSLSSS QLMVSDSPNA LFSIVSSSEP IVHTRQVLHH MQNPAYSANF  300
LNSNAAQNQM SFINPSHFLP RQPTSLLDQF LLPSSSTGST FQSTSSSFPP YTISAPAPSP  360
QTPAYPLFLP VQRPPVLKPS SRSENTADFP MNSWSDSGHH QSSSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64750.13e-15ERF family protein