PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027074472.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 194aa    MW: 22051.7 Da    PI: 9.4136
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027074472.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.73e-1856106255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y GVr ++ +g+++AeIrd + ng   r++lg+f+++e+Aa a+++a+ +++g
  XP_027074472.1  56 QYIGVRKRP-WGKYAAEIRDSTRNG--IRVWLGTFDSPEQAALAYDQAAFSMRG 106
                     799******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MDSSSYENPS PDQNFLFSEF SFWFLDNNNV PKQKLETTEA IQSLNLTRDS KRREKQYIGV  60
RKRPWGKYAA EIRDSTRNGI RVWLGTFDSP EQAALAYDQA AFSMRGTLAS LNFPMDRVQK  120
SLEGIKHNWE NGCSPAVVLK ATHKIRSSAS KRTRRNLKQQ HVKEKVVLEL EDLGADLLEE  180
LLSSSSESAA SSHN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.18e-47ERF family protein