PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027074722.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 243aa MW: 27839.2 Da PI: 7.559

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027074722.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.5	4.6e-11	130	187	4	61
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 ++ rr+ +NRe+A+rsR RK++ +e+L++ v L N++L ++l + +++ +++ XP_027074722.1 130 ERKRRRMLSNRESAKRSRMRKQKHLENLRNQVSRLRIGNRELVNRLRVVTHHCQLVRT 187 46789999*************************************9999999986655 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MNLYEYGHQN STFLLVPLNE EKKDAEWFPS LGLPRTTFCL PQHDDPILSP LGELRVETQE 60 PVISNSGSET YTPPPLDPTG QAISISGSEN YDPTPLDSSS GSEEPNQNNK RPYPGSDDTT 120 NPPVDSAADE RKRRRMLSNR ESAKRSRMRK QKHLENLRNQ VSRLRIGNRE LVNRLRVVTH 180 HCQLVRTDND RLRSESVILR QRLWDIRQVL LVRQLQQQLA TSAWPCNNLT PMNDETIPQP 240 LIT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	131	135	RKRRR
2	131	152	RKRRRMLSNRESAKRSRMRKQK
3	144	149	KRSRMR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22850.1	5e-26	bZIP family protein