PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027075598.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 357aa MW: 37880.6 Da PI: 4.9192

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027075598.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	77	2.3e-24	259	321	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+++v++L +eN+aL++el++ ++e++kl+se+ XP_027075598.1 259 ERELKRQKRKQSNRESARRSRLRKQAECEELQQRVESLNSENRALRDELQKVSEECEKLTSEN 321 89***********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MGTGEESTPA KPSKPTPTNQ ETPATPSYPD WSASMQAYYG AGATPPFFAS TVASPSPHPY 60 LWGNQHPLMP PYGTPVPYPA LYPGGVYAHP NMAMAPGAVQ APIESDAKAP DGKDRNTNKK 120 LKGPSGNPGL IAVKAGESGK AASGSGNDGA TQSAESGSEG SSDGSDENNN HELSATKKGS 180 FDQMLADGAT AQNNTSVANF QNSVPGNPVV SVPATNLNIG MDLWNPSSGA SGAMKMRPNP 240 GVSPAVAPGM MTDQWIQDER ELKRQKRKQS NRESARRSRL RKQAECEELQ QRVESLNSEN 300 RALRDELQKV SEECEKLTSE NNSIKEELTR LCGPEAVAKL ESSSITQLET NGDEDDH

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MGTGEESTPA KPSKPTPTNQ ETPATPSYPD WSASMQAYYG AGATPPFFAS TVASPSPHPY  60
LWGNQHPLMP PYGTPVPYPA LYPGGVYAHP NMAMAPGAVQ APIESDAKAP DGKDRNTNKK  120
LKGPSGNPGL IAVKAGESGK AASGSGNDGA TQSAESGSEG SSDGSDENNN HELSATKKGS  180
FDQMLADGAT AQNNTSVANF QNSVPGNPVV SVPATNLNIG MDLWNPSSGA SGAMKMRPNP  240
GVSPAVAPGM MTDQWIQDER ELKRQKRKQS NRESARRSRL RKQAECEELQ QRVESLNSEN  300
RALRDELQKV SEECEKLTSE NNSIKEELTR LCGPEAVAKL ESSSITQLET NGDEDDH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	276	282	RRSRLRK
2	276	283	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36730.1	3e-88	bZIP family protein