PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027075666.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 222aa    MW: 24714.8 Da    PI: 5.9367
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027075666.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM86.74.4e-27171361128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lp G+rF Pt+++++ +yLk+k+ g +l++ ++i+++d+y+++P +Lp  k+k +   ew+fF++r             t++gyW+  g   e+ 
  XP_027075666.1  17 LPFGYRFYPTNDQVI-HYLKQKILGGELPA-DIIPTIDVYSHNPDQLPlDKFKYGVAgEWFFFTHRLAGD-------LPTTDGYWSPAGLPAEIG 102
                     689************.**************.99***************76777766669****9987643.......34678************* PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +++ +g k++  fy g++p+g+k++W+m eyrl
  XP_027075666.1 103 L-DNRIIGFKQVVDFYWGHSPNGTKSNWTMYEYRL 136
                     *.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MAHPRNSSGD GKQVLNLPFG YRFYPTNDQV IHYLKQKILG GELPADIIPT IDVYSHNPDQ  60
LPLDKFKYGV AGEWFFFTHR LAGDLPTTDG YWSPAGLPAE IGLDNRIIGF KQVVDFYWGH  120
SPNGTKSNWT MYEYRLNPDQ LDGKVDETTQ AKVQNFVACR ARNKDKFQPT ATGGAIQERI  180
GSLPTNELEF LSSAVMDGGA NELAIMPDGK ETAPLISAHR IL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.11e-29NAC family protein