PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027075668.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 157aa    MW: 18258.6 Da    PI: 7.4394
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027075668.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.58.8e-1098143251
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                     +y GVr +++r+   Ae rd + ng  +r++ g+f+taee a a++++rk
  XP_027075668.1  98 QYIGVRKRPWRNH--AEMRDSTRNG--TRVWRGTFDTAEEGALAYDHCRK 143
                     799******7666..*****44465..*********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MTIEVSSVQI FLIKRVLTTN LRKRKKPTNG TFLDPVFFHK TVLSSSYKQI IAEGENLDFC  60
IAGDEDETRY LWDTGPSSSA CTDENEIIFS LQKEPEKQYI GVRKRPWRNH AEMRDSTRNG  120
TRVWRGTFDT AEEGALAYDH CRKWDVKTWV ENPQLQP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12127LRKRKKP
22226RKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-16ERF family protein