PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027075916.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 279aa    MW: 30550.6 Da    PI: 6.0457
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027075916.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2392e-12119165252
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkk 52 
                     +++GVr+++  g+WvAeIr p     +  ++ +lg+f +aeeAa+a ++   +
  XP_027075916.1 119 HFRGVRQRS-EGKWVAEIRNP-----HlgRTDWLGTFTSAEEAARAFDRKCIQ 165
                     69****999.7*********8.....667*****************9986655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MHRFADQMSQ QKSFKDEEHE CMVLALQHVI NNKEAEAQPQ GPGHQRQLAV MGELEGFASL  60
SPSSATASSG GPGGSSSSPG TMMEDKDHDQ SRSNDKKQKQ KKKKKNRDRE VDGEKRVVHF  120
RGVRQRSEGK WVAEIRNPHL GRTDWLGTFT SAEEAARAFD RKCIQYKGDR AKTNFPSSDY  180
ANANDDQSSS LQQQQQHALP PPAAAPPLSV NAPVGHASPL LTNTAVAGAT ATNSTATAAD  240
PGGTSWEEDE DLWDVFFRGD QIFSDIDWMM FDSSPPLGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.15e-19ERF family protein