PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027076071.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

GeBP

Protein Properties

Length: 237aa MW: 26988.6 Da PI: 6.5273

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027076071.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	59.2	1.1e-18	56	146	5	95
DUF573 5 rlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 + ws+e lLq +i+fkak+g+++ +d af++f++++ +f++sks + eK+rrLK K+ ++ kk + ++++ ++ + ++++ls++i XP_027076071.1 56 MAWSDEQVTKLLQCMIEFKAKKGVDADADPAAFHQFFEQKFQFRYSKSRVYEKVRRLKMKYCNNLKKFEIVEKKTGISKAELQTLNLSRQI 146 78*****************************************************************988888888888888999999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MASYNPISDH PPLSPQSHDE ENEDEEKGEE DYKAKFTADE PQTDKPSSVS AATTGMAWSD 60 EQVTKLLQCM IEFKAKKGVD ADADPAAFHQ FFEQKFQFRY SKSRVYEKVR RLKMKYCNNL 120 KKFEIVEKKT GISKAELQTL NLSRQISVGS AGAGDFESNY PLLNQSFEVE SRGVMKFGGK 180 TADELSFLKE NMHLIGDDKA KELERKWKTL HAVHFFKSLE LMKEQISLVL EATIGKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	9e-09	GeBP family protein