PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027076076.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GeBP
Protein Properties Length: 203aa    MW: 23507.5 Da    PI: 7.1989
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027076076.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57360.73.8e-1967158297
          DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 
                      fqr+w  +Dei +L  +id  +++ ++p +  d f ++ ++ +sf+ ++ ql eKir+L++K+kk+ k+     ++ +++ h+   fels+k+W
  XP_027076076.1  67 PFQRIWRRDDEIDILNIMIDRMEQNAAQPRSYEDIFSRIREHPLSFQPTRIQLKEKIRHLREKYKKNAKE----PQKFMKSYHEVRLFELSSKVW 157
                     69*******************999999999999999999999************************9999....888999*************** PP

          DUF573  97 g 97 
                     g
  XP_027076076.1 158 G 158
                     8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MGIIHEAKLQ ESSHEDDTNC GKPLDRKLSN SSMNVPVTEE DVKDAECFSK LDSSNNVVSR  60
GKVQEKPFQR IWRRDDEIDI LNIMIDRMEQ NAAQPRSYED IFSRIREHPL SFQPTRIQLK  120
EKIRHLREKY KKNAKEPQKF MKSYHEVRLF ELSSKVWGVE QSDFLQTSGT IKGNCHSKAK  180
EILEDGKDTF AVTSNSALHE QVG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.19e-17GeBP family protein